Single Cell Gene Expression - 10x Genomics
WEBReveal the full complexity of cellular diversity, cell by cell. Chromium Single Cell Gene Expression provides single cell transcriptome 3' gene expression and multiomic capabilities to profile tens of thousands of cells.
Home < Single Cell Expression Atlas - EMBL-EBI
WEBA flexible pipeline for Single Cell RNA-seq analysis that integrates many existing tools for filtering and mapping reads, quantifying expression, clustering, finding marker genes and variable genes. The workflows maximize reproducibility by making use of Bioconda, Biocontainers, NextFlow and Galaxy.
Current best practices in single‐cell RNA‐seq analysis: a tutorial
WEBJun 19, 2019 · Here, we detail the steps of a typical single‐cell RNA ‐seq analysis, including pre‐processing (quality control, normalization, data correction, feature selection, and dimensionality reduction) and cell‐ and gene‐level downstream analysis.
Single Cell Gene Expression - Official 10x Genomics Support
WEBChromium Single Cell Gene Expression provides single cell transcriptome 3' gene expression alongside the detection of surface protein expression or CRISPR edits in tens of thousands of cells. Scale experiments up or down with low-throughput and high-throughput solutions.
Simultaneous single-cell three-dimensional genome and gene expression ...
WEBApr 15, 2024 · Nature Methods - LiMCA offers a tool for co-profiling 3D genome structure and gene expression at the single-cell level, enabling researchers to elucidate the olfactory receptor gene...
Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview
WEBSince its introduction, single-cell RNA sequencing (scRNA-seq) approaches have revolutionized the genomics field as they created unprecedented opportunities for resolving cell heterogeneity by exploring gene expression profiles at a single-cell resolution.
scINSIGHT for interpreting single-cell gene expression from ...
WEBMar 21, 2022 · To benchmark the performance of scINSIGHT with ground truth information, we simulated synthetic single-cell gene expression data with known cell type compositions and condition-specific effects.
Single-cell genomics meets human genetics - Nature
WEBApr 21, 2023 · Single-cell genomic technologies are revealing the cellular composition, identities and states in tissues at unprecedented resolution. They have now scaled to the point that it is possible...
Memory Sequencing Reveals Heritable Single-Cell Gene Expression ...
WEBMemorySeq shows that in single cells, the expression pattern of some genes co-fluctuates slowly and is heritable, leading to subpopulations of cells with distinct behaviors, such as resistance to cancer drugs.
A practical guide to single-cell RNA-sequencing for biomedical …
WEBAug 18, 2017 · For protein expression studies, the application of multi-colour flow cytometry and fluorescently conjugated monoclonal antibodies has made the simultaneous assessment of small numbers of proteins on vast numbers of single cells commonplace in experimental and clinical research.
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